Journal of Animal Science and Biotechnology

Table 3 Descriptive statistics of inbreeding coefficient based on genomic relationship matrix (F_G), runs of homozygosity (ROH) for different lengths, total of ROH (F_{ROH Total}), and excess of homozygosity (F_exH)

From: Genome-wide landscape of genetic diversity, runs of homozygosity, and runs of heterozygosity in five Alpine and Mediterranean goat breeds

Item	Alpine breeds		Mediterranean breeds
Item	SAA	CAM	MUR	MAL	SAR
F_G
Mean	0.078	0.082	0.099	0.132	0.062
Median	0.074	0.059	0.082	0.122	0.039
Min	0.000	-0.103	0.001	0.009	-0.006
Max	0.344	0.274	0.324	0.296	0.300
SD	0.059	0.064	0.055	0.066	0.060
F_{ROH Total}
Mean	0.086	0.113	0.114	0.160	0.111
Median	0.071	0.091	0.099	0.151	0.093
Min	0.029	0.032	0.021	0.036	0.031
Max	0.330	0.316	0.320	0.329	0.323
SD	0.051	0.063	0.054	0.068	0.063
F_exH
Mean	0.023	0.028	0.030	0.041	0.044
Median	-0.001	-0.003	0.011	0.021	0.022
Min	-0.020	-0.089	-0.038	-0.044	-0.027
Max	0.307	0.228	0.278	0.220	0.295
SD	0.040	0.052	0.047	0.057	0.058
F_ROH 1–2 Mb
Mean	0.036	0.042	0.048	0.042	0.060
Median	0.035	0.042	0.050	0.043	0.060
Min	0.024	0.020	0.021	0.022	0.030
Max	0.054	0.053	0.062	0.054	0.096
SD	0.006	0.006	0.007	0.005	0.011
F_ROH 2–4 Mb
Mean	0.012	0.016	0.020	0.024	0.010
Median	0.010	0.016	0.020	0.023	0.009
Min	0.002	0.005	0.001	0.004	0.001
Max	0.037	0.041	0.040	0.038	0.034
SD	0.007	0.007	0.006	0.007	0.007
F_ROH 4–8 Mb
Mean	0.015	0.021	0.020	0.027	0.014
Median	0.015	0.018	0.020	0.027	0.012
Min	0.002	0.004	0.002	0.005	0.002
Max	0.039	0.064	0.038	0.057	0.044
SD	0.010	0.013	0.009	0.012	0.010
F_ROH > 8 Mb
Mean	0.042	0.053	0.042	0.083	0.058
Median	0.026	0.028	0.020	0.069	0.037
Min	0.004	0.004	0.003	0.003	0.003
Max	0.277	0.241	0.266	0.234	0.265
SD	0.047	0.058	0.054	0.064	0.059

SAA Saanen, CAM Camosciata delle Alpi, MUR Murciano-Granadina, MAL Maltese, SAR Sarda

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ISSN: 2049-1891

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